Class implementing a readout neuron model for e-prop plasticity. More...

#include <eprop_readout_bsshslm_2020.h>

Inheritance diagram for nest::eprop_readout_bsshslm_2020:

Collaboration diagram for nest::eprop_readout_bsshslm_2020:

Classes
struct	Buffers_
	Structure of buffers. More...

struct	Parameters_
	Structure of parameters. More...

struct	State_
	Structure of state variables. More...

struct	Variables_
	Structure of internal variables. More...

Public Member Functions
	eprop_readout_bsshslm_2020 ()
	Default constructor.

	eprop_readout_bsshslm_2020 (const eprop_readout_bsshslm_2020 &)
	Copy constructor.

void	sends_secondary_event (LearningSignalConnectionEvent &) override
	Required to check if source node may send a LearningSignalConnectionEvent.

void	sends_secondary_event (DelayedRateConnectionEvent &) override
	Required to check, if source neuron may send a SecondaryEvent.

void	handle (SpikeEvent &) override
	Handle incoming spike events.

void	handle (CurrentEvent &) override
	Handler for current events.

void	handle (DelayedRateConnectionEvent &) override
	Handler for delay rate neuron events.

void	handle (DataLoggingRequest &) override
	Handler for universal data logging request.

size_t	handles_test_event (SpikeEvent &, size_t) override
	Check if the node can handle a particular event and receptor type.

size_t	handles_test_event (CurrentEvent &, size_t) override

size_t	handles_test_event (DelayedRateConnectionEvent &, size_t) override

size_t	handles_test_event (DataLoggingRequest &, size_t) override

void	get_status (Dictionary &) const override
	Export properties of the node by setting entries in the status dictionary.

void	set_status (const Dictionary &) override
	Change properties of the node according to the entries in the dictionary.

virtual void	handle (SpikeEvent &e)
	Handle incoming spike events.

virtual void	handle (WeightRecorderEvent &e)
	Handle incoming weight recording events.

virtual void	handle (RateEvent &e)
	Handler for rate events.

virtual void	handle (DataLoggingRequest &e)
	Handler for universal data logging request.

virtual void	handle (DataLoggingReply &e)
	Handler for universal data logging request.

virtual void	handle (CurrentEvent &e)
	Handler for current events.

virtual void	handle (ConductanceEvent &e)
	Handler for conductance events.

virtual void	handle (DoubleDataEvent &e)
	Handler for DoubleData events.

virtual void	handle (GapJunctionEvent &e)
	Handler for gap junction events.

virtual void	handle (InstantaneousRateConnectionEvent &e)
	Handler for rate neuron events.

virtual void	handle (DiffusionConnectionEvent &e)
	Handler for rate neuron events.

virtual void	handle (DelayedRateConnectionEvent &e)
	Handler for delay rate neuron events.

virtual void	handle (LearningSignalConnectionEvent &e)
	Handler for learning signal connection events.

virtual void	handle (SICEvent &e)
	Handler for slow inward current events (SICEvents).

virtual size_t	handles_test_event (SpikeEvent &, size_t receptor_type)
	Check if the node can handle a particular event and receptor type.

virtual size_t	handles_test_event (WeightRecorderEvent &, size_t receptor_type)

virtual size_t	handles_test_event (RateEvent &, size_t receptor_type)

virtual size_t	handles_test_event (DataLoggingRequest &, size_t receptor_type)

virtual size_t	handles_test_event (CurrentEvent &, size_t receptor_type)

virtual size_t	handles_test_event (ConductanceEvent &, size_t receptor_type)

virtual size_t	handles_test_event (DoubleDataEvent &, size_t receptor_type)

virtual size_t	handles_test_event (DSSpikeEvent &, size_t receptor_type)

virtual size_t	handles_test_event (DSCurrentEvent &, size_t receptor_type)

virtual size_t	handles_test_event (GapJunctionEvent &, size_t receptor_type)

virtual size_t	handles_test_event (InstantaneousRateConnectionEvent &, size_t receptor_type)

virtual size_t	handles_test_event (DiffusionConnectionEvent &, size_t receptor_type)

virtual size_t	handles_test_event (DelayedRateConnectionEvent &, size_t receptor_type)

virtual size_t	handles_test_event (LearningSignalConnectionEvent &, size_t receptor_type)

virtual size_t	handles_test_event (SICEvent &, size_t receptor_type)

virtual void	sends_secondary_event (GapJunctionEvent &ge)
	Required to check, if source neuron may send a SecondaryEvent.

virtual void	sends_secondary_event (InstantaneousRateConnectionEvent &re)
	Required to check, if source neuron may send a SecondaryEvent.

virtual void	sends_secondary_event (DiffusionConnectionEvent &de)
	Required to check, if source neuron may send a SecondaryEvent.

virtual void	sends_secondary_event (DelayedRateConnectionEvent &re)
	Required to check, if source neuron may send a SecondaryEvent.

virtual void	sends_secondary_event (LearningSignalConnectionEvent &re)
	Required to check if source node may send a LearningSignalConnectionEvent.

virtual void	sends_secondary_event (SICEvent &sic)
	Required to check if source node may send a SICEvent.

Public Member Functions inherited from nest::EpropArchivingNodeReadout< true >
	EpropArchivingNodeReadout ()
	Constructs a new EpropArchivingNodeReadout object.

	EpropArchivingNodeReadout (const EpropArchivingNodeReadout &other)
	Constructs a new EpropArchivingNodeReadout object by copying another EpropArchivingNodeReadout object.

void	append_new_eprop_history_entry (long time_step)
	Creates an entry for the specified time step at the end of the eprop history.

void	write_error_signal_to_history (long time_step, const double error_signal)
	Writes the error signal to the eprop history at the specified time step.

void	get_status (Dictionary &d) const override
	Export properties of the node by setting entries in the status dictionary.

void	set_status (const Dictionary &d) override
	Change properties of the node according to the entries in the dictionary.

Public Member Functions inherited from nest::EpropArchivingNode< HistEntryEpropReadout >
	EpropArchivingNode ()
	Constructs a new EpropArchivingNode object.

	EpropArchivingNode (const EpropArchivingNode &n)
	Constructs a new EpropArchivingNode object by copying another EpropArchivingNode object.

void	register_eprop_connection () override
	Registers an eprop connection.

void	initialize_update_history () override
	Initializes the update history.

void	write_update_to_history (const long t_previous_update, const long t_current_update, const bool is_flush_event, const bool previous_was_flush_event) override
	Registers the current update in the update history and deregisters the previous update.

void	require_eprop_history_entry (const typename std::vector< HistEntryEpropReadout >::iterator eprop_hist_it, const long time_step) const
	Requires that an e-prop history iterator points to the expected time step.

std::vector< HistEntryEpropUpdate >::iterator	get_update_history (const long time_step)
	Retrieves the update history entry for a specific time step.

std::vector< HistEntryEpropReadout >::iterator	get_eprop_history (const long time_step)
	Retrieves the eprop history entry for a specified time step.

void	erase_used_eprop_history () override
	Erases the used eprop history for `bsshslm_2020` models.

void	erase_used_eprop_history (const long t_spike, const long t_spike_previous) override
	Erases the used eprop history.

double	get_eprop_history_duration () const
	Retrieves eprop history size.

long	get_eprop_isi_trace_cutoff () const
	Retrieves the eprop ISI trace cutoff.

Public Member Functions inherited from nest::Node
	Node ()

	Node (Node const &)

virtual	~Node ()

virtual Node *	clone () const
	This function creates a new object by calling the derived class' copy constructor and returning its pointer.

virtual bool	has_proxies () const
	Returns true if the node has proxies on remote threads.

virtual bool	supports_urbanczik_archiving () const
	Returns true if the node supports the Urbanczik-Senn plasticity rule.

virtual bool	local_receiver () const
	Returns true if the node only receives events from nodes/devices on the same thread.

virtual bool	one_node_per_process () const
	Returns true if the node exists only once per process, but does not have proxies on remote threads.

virtual bool	is_off_grid () const
	Returns true if the node sends/receives off-grid events.

virtual bool	is_proxy () const
	Returns true if the node is a proxy node.

std::string	get_name () const
	Return class name.

virtual std::string	get_element_type () const
	Return the element type of the node.

size_t	get_node_id () const
	Return global Network ID.

int	get_model_id () const
	Return model ID of the node.

bool	is_frozen () const
	Returns true if node is frozen, i.e., shall not be updated.

bool	node_uses_wfr () const
	Returns true if the node uses the waveform relaxation method.

void	set_node_uses_wfr (const bool)
	Sets node_uses_wfr_ member variable (to be able to set it to "true" for any class derived from Node)

void	init ()
	Initialize node prior to first simulation after node has been created.

virtual void	calibrate_time (const TimeConverter &)
	Re-calculate time-based properties of the node.

virtual void	post_run_cleanup ()
	Cleanup node after Run.

virtual void	finalize ()
	Finalize node.

virtual bool	wfr_update (Time const &, const long, const long)
	Advance the state of the node in time through the given interval (see Node::update() for more details).

virtual size_t	send_test_event (Node &receiving_node, size_t receptor_type, synindex syn_id, bool dummy_target)
	Send an event to the receiving_node passed as an argument.

virtual void	register_stdp_connection (double, double)
	Register a STDP connection.

virtual double	get_Ca_minus () const
	Return the Ca_minus value at time Ca_t which corresponds to the time of the last update in Calcium concentration which is performed each time a Node spikes.

virtual double	get_synaptic_elements (std::string) const
	Get the number of synaptic element for the current Node at Ca_t which corresponds to the time of the last spike.

virtual int	get_synaptic_elements_vacant (std::string) const
	Get the number of vacant synaptic element for the current Node Return 0 if not overridden.

virtual int	get_synaptic_elements_connected (std::string) const
	Get the number of connected synaptic element for the current Node.

virtual std::map< std::string, double >	get_synaptic_elements () const
	Get the number of all synaptic elements for the current Node at time t.

virtual void	update_synaptic_elements (double)
	Triggers the update of all SynapticElements stored in the synaptic_element_map_.

virtual void	decay_synaptic_elements_vacant ()
	Is used to reduce the number of synaptic elements in the node through time.

virtual void	connect_synaptic_element (std::string, int)
	Is used to update the number of connected synaptic elements (SynapticElement::z_connected_) when a synapse is formed or deleted.

virtual double	get_K_value (double t)
	return the Kminus value at t (in ms).

virtual double	get_LTD_value (double t)

virtual void	get_K_values (double t, double &Kminus, double &nearest_neighbor_Kminus, double &Kminus_triplet)
	write the Kminus, nearest_neighbor_Kminus, and Kminus_triplet values at t (in ms) to the provided locations.

virtual void	get_history (double t1, double t2, std::deque< histentry >::iterator start, std::deque< histentry >::iterator finish)
	return the spike history for (t1,t2].

virtual void	get_LTP_history (double t1, double t2, std::deque< histentry_extended >::iterator start, std::deque< histentry_extended >::iterator finish)

virtual void	get_urbanczik_history (double t1, double t2, std::deque< histentry_extended >::iterator start, std::deque< histentry_extended >::iterator finish, int)

virtual double	get_C_m (int comp)

virtual double	get_g_L (int comp)

virtual double	get_tau_L (int comp)

virtual double	get_tau_s (int comp)

virtual double	get_tau_syn_ex (int comp)

virtual double	get_tau_syn_in (int comp)

virtual void	compute_gradient (const long t_spike, const long t_spike_previous, double &z_previous_buffer, double &z_bar, double &e_bar, double &e_bar_reg, double &epsilon, double &weight, const CommonSynapseProperties &cp, WeightOptimizer *optimizer, bool is_flush_event, bool previous_was_flush_event, double &sum_grad, long &remaining_steps_until_cutoff, long &decay_steps)
	Compute gradient change for eprop synapses.

virtual void	event_hook (DSSpikeEvent &)
	Modify Event object parameters during event delivery.

virtual void	event_hook (DSCurrentEvent &)

void	set_thread (size_t)
	Store the number of the thread to which the node is assigned.

size_t	get_thread () const
	Retrieve the number of the thread to which the node is assigned.

void	set_vp (size_t)
	Store the number of the virtual process to which the node is assigned.

size_t	get_vp () const
	Retrieve the number of the virtual process to which the node is assigned.

void	set_model_id (int)
	Set the model id.

void	set_initialized ()
	Execute post-initialization actions in node models.

virtual SignalType	sends_signal () const

virtual SignalType	receives_signal () const

Dictionary	get_status_base ()
	Return a dictionary with the node's properties.

void	set_status_base (const Dictionary &)
	Set status dictionary of a node.

bool	is_model_prototype () const
	Returns true if node is model prototype.

void	set_thread_lid (const size_t)
	set thread local index

size_t	get_thread_lid () const
	get thread local index

virtual void	set_local_device_id (const size_t lsdid)
	Sets the local device id.

virtual size_t	get_local_device_id () const
	Gets the local device id.

void	set_tmp_nc_index (size_t index)
	Set index in node collection; required by ThirdOutBuilder.

size_t	get_tmp_nc_index ()
	Return and invalidate index in node collection; required by ThirdOutBuilder.

Public Member Functions inherited from nest::FlushEventMechanism
	FlushEventMechanism ()
	Default constructor.

	FlushEventMechanism (const FlushEventMechanism &n)
	Copy constructor.

virtual	~FlushEventMechanism ()=default
	Destructor.

void	set_last_event_time (const long last_event_time)
	Sets the time the neuron last sent an event (spike or flush event).

long	get_last_event_time () const
	Gets the last time the neuron sent an event (spike or flush event).

void	pre_run_hook ()
	Re-calculates dependent parameters.

bool	flush_event_is_due (const long current_time) const
	Checks if a flush event is due at the current time.

void	get_status (Dictionary &d) const
	Retrieves parameters and adds them to the status dictionary.

void	set_status (const Dictionary &d, Node *node, const bool check_eprop_constraint=false)
	Sets and validates parameters from the status dictionary.

Public Member Functions inherited from nest::IgnoreAndSpikeMechanism
	IgnoreAndSpikeMechanism ()
	Default constructor.

	IgnoreAndSpikeMechanism (const IgnoreAndSpikeMechanism &n)
	Copy constructor.

virtual	~IgnoreAndSpikeMechanism ()=default
	Virtual destructor.

bool	spike_event_is_due (bool emit_dynamic_spike)
	Updates spike schedule and returns whether a spike should be emitted.

void	get_status (Dictionary &d) const
	Retrieves parameters and adds them to the status dictionary.

void	set_status (const Dictionary &d, Node *node)
	Sets and validates parameters from the status dictionary.

Private Types
enum	RateSynapseTypes { READOUT_SIG = MIN_RATE_RECEPTOR , TARGET_SIG , SUP_RATE_RECEPTOR }
	Enumeration of spike receptor types. More...

Private Member Functions
void	init_buffers_ () override
	Configure persistent internal data structures.

void	pre_run_hook () override
	Re-calculate dependent parameters of the node.

void	update (Time const &, const long, const long) override
	Advance the state of the node in time through the given interval.

double	compute_gradient (std::vector< long > &presyn_isis, const long t_previous_update, const long t_previous_trigger_spike, const double kappa, const bool average_gradient) override
	Compute gradient change for eprop synapses.

long	get_shift () const override
	Retrieves the temporal shift of the signal.

bool	is_eprop_recurrent_node () const override
	Checks if the node is part of the recurrent network and thus not a readout neuron.

void	compute_error_signal_mean_squared_error ()
	Compute the error signal based on the mean-squared error loss.

void	compute_error_signal_cross_entropy ()
	Compute the error signal based on the cross-entropy loss.

double	get_v_m_ () const
	Get the current value of the membrane voltage.

double	get_readout_signal_ () const
	Get the current value of the normalized readout signal.

double	get_readout_signal_unnorm_ () const
	Get the current value of the unnormalized readout signal.

double	get_target_signal_ () const
	Get the current value of the target signal.

double	get_error_signal_ () const
	Get the current value of the error signal.

Private Attributes
void(eprop_readout_bsshslm_2020::*	compute_error_signal )()
	Compute the error signal based on a loss function.

Parameters_	P_
	Structure of parameters.

State_	S_
	Structure of state variables.

Variables_	V_
	Structure of internal variables.

Buffers_	B_
	Structure of buffers.

Static Private Attributes
static const size_t	MIN_RATE_RECEPTOR = 1
	Minimal spike receptor type.

static RecordablesMap< eprop_readout_bsshslm_2020 >	recordablesMap_
	Map storing a static set of recordables.

Friends
class	RecordablesMap< eprop_readout_bsshslm_2020 >
	Map for storing a static set of recordables.

class	UniversalDataLogger< eprop_readout_bsshslm_2020 >
	Logger for universal data supporting the data logging request / reply mechanism. Populated with a recordables map.

Additional Inherited Members
Public Attributes inherited from nest::Node
DeprecationWarning	deprecation_warning
	Member of DeprecationWarning class to be used by models if parameters are deprecated.

Protected Member Functions inherited from nest::EpropArchivingNodeReadout< true >
long	model_dependent_history_shift_ () const override
	Returns the correct shift for history depending on whether it is a normal or a bsshslm_2020 model.

Protected Member Functions inherited from nest::Node
virtual void	init_state_ ()
	Configure state variables depending on runtime information.

virtual void	set_initialized_ ()

Model &	get_model_ () const

void	set_frozen_ (bool frozen)
	Mark node as frozen.

template<typename ConcreteNode >
const ConcreteNode &	downcast (const Node &)
	Auxiliary function to downcast a Node to a concrete class derived from Node.

Protected Attributes inherited from nest::EpropArchivingNode< HistEntryEpropReadout >
size_t	eprop_indegree_
	Number of incoming eprop synapses.

double	eprop_isi_trace_cutoff_
	Time interval from the previous spike until the cutoff of e-prop update computation between two spikes (ms).

std::vector< HistEntryEpropUpdate >	update_history_
	History of updates still needed by at least one synapse.

std::vector< HistEntryEpropReadout >	eprop_history_
	History of dynamic variables needed for e-prop plasticity.

const long	offset_gen_
	Offset since generator signals start from time step 1.

const long	delay_in_rec_
	Transmission delay from input to recurrent neurons.

const long	delay_rec_out_
	Transmission delay from recurrent to output neurons.

const long	delay_out_norm_
	Transmission delay between output neurons for normalization.

const long	delay_out_rec_
	Transmission delay from output neurons to recurrent neurons.

Protected Attributes inherited from nest::FlushEventMechanism
double	flush_event_send_interval_
	Interval since previous event after which a flush event is sent (ms).

long	flush_event_send_interval_steps_
	Interval since previous event after which a flush event is sent (steps).

long	last_event_time_
	Time of last spike or flush event (steps).

Detailed Description

Class implementing a readout neuron model for e-prop plasticity.

Class implementing a current-based leaky integrate readout neuron model with delta-shaped postsynaptic currents for e-prop plasticity according to Bellec et al. (2020).

Member Enumeration Documentation

◆ RateSynapseTypes

enum nest::eprop_readout_bsshslm_2020::RateSynapseTypes

private

Enumeration of spike receptor types.

Enumerator
READOUT_SIG
TARGET_SIG
SUP_RATE_RECEPTOR

Constructor & Destructor Documentation

◆ eprop_readout_bsshslm_2020() [1/2]

nest::eprop_readout_bsshslm_2020::eprop_readout_bsshslm_2020 ( )

Default constructor.

References recordablesMap_.

◆ eprop_readout_bsshslm_2020() [2/2]

nest::eprop_readout_bsshslm_2020::eprop_readout_bsshslm_2020 ( const eprop_readout_bsshslm_2020 & n )

Copy constructor.

Member Function Documentation

◆ compute_error_signal_cross_entropy()

void nest::eprop_readout_bsshslm_2020::compute_error_signal_cross_entropy ( )

private

Compute the error signal based on the cross-entropy loss.

References B_, nest::eprop_readout_bsshslm_2020::Parameters_::E_L_, nest::eprop_readout_bsshslm_2020::State_::error_signal_, nest::eprop_readout_bsshslm_2020::Buffers_::normalization_rate_, P_, nest::eprop_readout_bsshslm_2020::State_::readout_signal_, nest::eprop_readout_bsshslm_2020::State_::readout_signal_unnorm_, S_, nest::eprop_readout_bsshslm_2020::State_::target_signal_, and nest::eprop_readout_bsshslm_2020::State_::v_m_.

Referenced by pre_run_hook().

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◆ compute_error_signal_mean_squared_error()

void nest::eprop_readout_bsshslm_2020::compute_error_signal_mean_squared_error ( )

private

Compute the error signal based on the mean-squared error loss.

References nest::eprop_readout_bsshslm_2020::Parameters_::E_L_, nest::eprop_readout_bsshslm_2020::State_::error_signal_, P_, nest::eprop_readout_bsshslm_2020::State_::readout_signal_, nest::eprop_readout_bsshslm_2020::State_::readout_signal_unnorm_, S_, nest::eprop_readout_bsshslm_2020::State_::target_signal_, and nest::eprop_readout_bsshslm_2020::State_::v_m_.

Referenced by pre_run_hook().

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◆ compute_gradient()

double nest::eprop_readout_bsshslm_2020::compute_gradient	(	std::vector< long > &	presyn_isis,
		const long	t_previous_update,
		const long	t_previous_trigger_spike,
		const double	kappa,
		const bool	average_gradient
	)

overrideprivatevirtual

Compute gradient change for eprop synapses.

This method is called from an eprop synapse on the eprop target neuron. It updates various parameters related to e-prop plasticity according to Bellec et al. (2020).

Parameters

presyn_isis	[in, out] Vector of inter-spike intervals.
t_previous_update	[in] Time of the last update.
t_previous_trigger_spike	[in] Time of the last trigger spike.
kappa	[in] Decay factor for the eligibility trace.
average_gradient	[in] Boolean flag determining whether to compute an average of the gradients over the given period.

Returns: Returns the computed gradient value.

Reimplemented from nest::Node.

References nest::EpropArchivingNode< HistEntryEpropReadout >::get_eprop_history(), nest::SimulationManager::get_eprop_learning_window(), nest::Time::get_steps(), nest::kernel(), nest::eprop_readout_bsshslm_2020::Variables_::P_v_m_, nest::eprop_readout_bsshslm_2020::Variables_::P_z_in_, nest::EpropArchivingNode< HistEntryEpropReadout >::require_eprop_history_entry(), nest::KernelManager::simulation_manager, and V_.

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◆ get_error_signal_()

double nest::eprop_readout_bsshslm_2020::get_error_signal_ ( ) const

inlineprivate

Get the current value of the error signal.

References nest::eprop_readout_bsshslm_2020::State_::error_signal_, and S_.

Referenced by nest::RecordablesMap< HostNode >::create().

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◆ get_readout_signal_()

double nest::eprop_readout_bsshslm_2020::get_readout_signal_ ( ) const

inlineprivate

Get the current value of the normalized readout signal.

References nest::eprop_readout_bsshslm_2020::State_::readout_signal_, and S_.

Referenced by nest::RecordablesMap< HostNode >::create().

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◆ get_readout_signal_unnorm_()

double nest::eprop_readout_bsshslm_2020::get_readout_signal_unnorm_ ( ) const

inlineprivate

Get the current value of the unnormalized readout signal.

References nest::eprop_readout_bsshslm_2020::State_::readout_signal_unnorm_, and S_.

Referenced by nest::RecordablesMap< HostNode >::create().

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◆ get_shift()

long nest::eprop_readout_bsshslm_2020::get_shift ( ) const

inlineoverrideprivatevirtual

Retrieves the temporal shift of the signal.

Retrieves the number of steps the time-point of the signal has to be shifted to place it at the correct location in the e-prop-related histories.

Note: Unlike the original e-prop, where signals arise instantaneously, NEST considers connection delays. Thus, to reproduce the original results, we compensate for the delays and synchronize the signals by shifting the history.

Returns: The number of time steps to shift.

Exceptions

IllegalConnection

Reimplemented from nest::Node.

References nest::EpropArchivingNode< HistEntryEpropReadout >::delay_in_rec_, nest::EpropArchivingNode< HistEntryEpropReadout >::delay_rec_out_, and nest::EpropArchivingNode< HistEntryEpropReadout >::offset_gen_.

Referenced by update().

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◆ get_status()

void nest::eprop_readout_bsshslm_2020::get_status ( Dictionary & ) const

inlineoverridevirtual

Export properties of the node by setting entries in the status dictionary.

Parameters

d	Dictionary.

Implements nest::Node.

References nest::eprop_readout_bsshslm_2020::Parameters_::get(), nest::eprop_readout_bsshslm_2020::State_::get(), nest::EpropArchivingNodeReadout< hist_shift_required >::get_status(), P_, READOUT_SIG, nest::names::readout_signal(), nest::names::receptor_types(), nest::names::recordables(), recordablesMap_, S_, TARGET_SIG, and nest::names::target_signal().

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◆ get_target_signal_()

double nest::eprop_readout_bsshslm_2020::get_target_signal_ ( ) const

inlineprivate

Get the current value of the target signal.

References S_, and nest::eprop_readout_bsshslm_2020::State_::target_signal_.

Referenced by nest::RecordablesMap< HostNode >::create().

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◆ get_v_m_()

double nest::eprop_readout_bsshslm_2020::get_v_m_ ( ) const

inlineprivate

Get the current value of the membrane voltage.

References nest::eprop_readout_bsshslm_2020::Parameters_::E_L_, P_, S_, and nest::eprop_readout_bsshslm_2020::State_::v_m_.

Referenced by nest::RecordablesMap< HostNode >::create().

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◆ handle() [1/18]

void nest::Node::handle ( ConductanceEvent & e )

virtual

Handler for conductance events.

See also: handle(thread, SpikeEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [2/18]

void nest::eprop_readout_bsshslm_2020::handle ( CurrentEvent & e )

overridevirtual

Handler for current events.

See also: handle(thread, SpikeEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

References nest::RingBuffer::add_value(), B_, nest::eprop_readout_bsshslm_2020::Buffers_::currents_, and nest::kernel().

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◆ handle() [3/18]

void nest::Node::handle ( CurrentEvent & e )

virtual

Handler for current events.

See also: handle(thread, SpikeEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [4/18]

void nest::Node::handle ( DataLoggingReply & e )

virtual

Handler for universal data logging request.

See also: handle(SpikeEvent&)

Exceptions

UnexpectedEvent

Note: There is no connect_sender() for DataLoggingReply, since this event is only used as "back channel" for DataLoggingRequest.

Reimplemented from nest::Node.

◆ handle() [5/18]

void nest::eprop_readout_bsshslm_2020::handle ( DataLoggingRequest & e )

overridevirtual

Handler for universal data logging request.

See also: handle(SpikeEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

References B_, and nest::eprop_readout_bsshslm_2020::Buffers_::logger_.

◆ handle() [6/18]

void nest::Node::handle ( DataLoggingRequest & e )

virtual

Handler for universal data logging request.

See also: handle(SpikeEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [7/18]

void nest::eprop_readout_bsshslm_2020::handle ( DelayedRateConnectionEvent & e )

overridevirtual

Handler for delay rate neuron events.

See also: handle(thread, DelayedRateConnectionEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

References B_, nest::eprop_readout_bsshslm_2020::Buffers_::normalization_rate_, READOUT_SIG, S_, SUP_RATE_RECEPTOR, TARGET_SIG, and nest::eprop_readout_bsshslm_2020::State_::target_signal_.

◆ handle() [8/18]

void nest::Node::handle ( DelayedRateConnectionEvent & e )

virtual

Handler for delay rate neuron events.

See also: handle(thread, DelayedRateConnectionEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [9/18]

void nest::Node::handle ( DiffusionConnectionEvent & e )

virtual

Handler for rate neuron events.

See also: handle(thread, InstantaneousRateConnectionEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [10/18]

void nest::Node::handle ( DoubleDataEvent & e )

virtual

Handler for DoubleData events.

See also: handle(thread, SpikeEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [11/18]

void nest::Node::handle ( GapJunctionEvent & e )

virtual

Handler for gap junction events.

See also: handle(thread, GapJunctionEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [12/18]

void nest::Node::handle ( InstantaneousRateConnectionEvent & e )

virtual

Handler for rate neuron events.

See also: handle(thread, InstantaneousRateConnectionEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [13/18]

void nest::Node::handle ( LearningSignalConnectionEvent & e )

virtual

Handler for learning signal connection events.

See also: handle(thread, LearningSignalConnectionEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [14/18]

void nest::Node::handle ( RateEvent & e )

virtual

Handler for rate events.

See also: handle(SpikeEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [15/18]

void nest::Node::handle ( SICEvent & e )

virtual

Handler for slow inward current events (SICEvents).

See also: handle(thread,SICEvent&)

Exceptions

UnexpectedEvent

Reimplemented from nest::Node.

◆ handle() [16/18]

void nest::eprop_readout_bsshslm_2020::handle ( SpikeEvent & e )

overridevirtual

Handle incoming spike events.

Default implementation of event handlers just throws an UnexpectedEvent exception.

Parameters

thrd	Id of the calling thread.
e	Event object.

This handler has to be implemented if a Node should accept spike events.

See also: class SpikeEvent; class UnexpectedEvent

Exceptions

UnexpectedEvent This is the default event to throw.

Reimplemented from nest::Node.

References nest::RingBuffer::add_value(), B_, nest::kernel(), and nest::eprop_readout_bsshslm_2020::Buffers_::spikes_.

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◆ handle() [17/18]

void nest::Node::handle ( SpikeEvent & e )

virtual

Handle incoming spike events.

Default implementation of event handlers just throws an UnexpectedEvent exception.

Parameters

thrd	Id of the calling thread.
e	Event object.

This handler has to be implemented if a Node should accept spike events.

See also: class SpikeEvent; class UnexpectedEvent

Exceptions

UnexpectedEvent This is the default event to throw.

Reimplemented from nest::Node.

◆ handle() [18/18]

void nest::Node::handle ( WeightRecorderEvent & e )

virtual

Handle incoming weight recording events.

Parameters

thrd	Id of the calling thread.
e	Event object.

This handler has to be implemented if a Node should accept weight recording events.

See also: class WeightRecordingEvent

Reimplemented from nest::Node.

◆ handles_test_event() [1/19]

size_t nest::Node::handles_test_event	(	ConductanceEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [2/19]

size_t nest::Node::handles_test_event	(	CurrentEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [3/19]

size_t nest::eprop_readout_bsshslm_2020::handles_test_event	(	CurrentEvent &	,
		size_t	receptor_type
	)

inlineoverridevirtual

Reimplemented from nest::Node.

References nest::Node::get_name().

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◆ handles_test_event() [4/19]

size_t nest::Node::handles_test_event	(	DataLoggingRequest &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [5/19]

size_t nest::eprop_readout_bsshslm_2020::handles_test_event	(	DataLoggingRequest &	dlr,
		size_t	receptor_type
	)

inlineoverridevirtual

Reimplemented from nest::Node.

References B_, nest::Node::get_name(), nest::eprop_readout_bsshslm_2020::Buffers_::logger_, and recordablesMap_.

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◆ handles_test_event() [6/19]

size_t nest::Node::handles_test_event	(	DelayedRateConnectionEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [7/19]

size_t nest::eprop_readout_bsshslm_2020::handles_test_event	(	DelayedRateConnectionEvent &	e,
		size_t	receptor_type
	)

inlineoverridevirtual

Reimplemented from nest::Node.

References nest::Node::get_name(), nest::ModelManager::get_node_model_id(), nest::kernel(), nest::KernelManager::model_manager, SUP_RATE_RECEPTOR, and TARGET_SIG.

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◆ handles_test_event() [8/19]

size_t nest::Node::handles_test_event	(	DiffusionConnectionEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [9/19]

size_t nest::Node::handles_test_event	(	DoubleDataEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [10/19]

size_t nest::Node::handles_test_event	(	DSCurrentEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [11/19]

size_t nest::Node::handles_test_event	(	DSSpikeEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [12/19]

size_t nest::Node::handles_test_event	(	GapJunctionEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [13/19]

size_t nest::Node::handles_test_event	(	InstantaneousRateConnectionEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [14/19]

size_t nest::Node::handles_test_event	(	LearningSignalConnectionEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [15/19]

size_t nest::Node::handles_test_event	(	RateEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [16/19]

size_t nest::Node::handles_test_event	(	SICEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ handles_test_event() [17/19]

size_t nest::Node::handles_test_event	(	SpikeEvent &	,
		size_t	receptor_type
	)

virtual

Check if the node can handle a particular event and receptor type.

This function is called upon connection setup by send_test_event().

handles_test_event() function is used to verify that the receiver can handle the event. It can also be used by the receiver to return information to the sender in form of the returned port. The default implementation throws an IllegalConnection exception. Any node class should define handles_test_event() functions for all those event types it can handle.

See Kunkel et al, Front Neuroinform 8:78 (2014), Sec 3.

Note: The semantics of all other handles_test_event() functions is identical.

Exceptions

IllegalConnection

Reimplemented from nest::Node.

◆ handles_test_event() [18/19]

size_t nest::eprop_readout_bsshslm_2020::handles_test_event	(	SpikeEvent &	,
		size_t	receptor_type
	)

inlineoverridevirtual

Check if the node can handle a particular event and receptor type.

This function is called upon connection setup by send_test_event().

handles_test_event() function is used to verify that the receiver can handle the event. It can also be used by the receiver to return information to the sender in form of the returned port. The default implementation throws an IllegalConnection exception. Any node class should define handles_test_event() functions for all those event types it can handle.

See Kunkel et al, Front Neuroinform 8:78 (2014), Sec 3.

Note: The semantics of all other handles_test_event() functions is identical.

Exceptions

IllegalConnection

Reimplemented from nest::Node.

References nest::Node::get_name().

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◆ handles_test_event() [19/19]

size_t nest::Node::handles_test_event	(	WeightRecorderEvent &	,
		size_t	receptor_type
	)

virtual

Reimplemented from nest::Node.

◆ init_buffers_()

void nest::eprop_readout_bsshslm_2020::init_buffers_ ( )

overrideprivatevirtual

Configure persistent internal data structures.

Let node configure persistent internal data structures, such as input buffers or ODE solvers, to runtime information prior to first simulation.

Reimplemented from nest::Node.

References B_, nest::RingBuffer::clear(), nest::eprop_readout_bsshslm_2020::Buffers_::currents_, nest::eprop_readout_bsshslm_2020::Buffers_::logger_, nest::eprop_readout_bsshslm_2020::Buffers_::normalization_rate_, and nest::eprop_readout_bsshslm_2020::Buffers_::spikes_.

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◆ is_eprop_recurrent_node()

bool nest::eprop_readout_bsshslm_2020::is_eprop_recurrent_node ( ) const

inlineoverrideprivatevirtual

Checks if the node is part of the recurrent network and thus not a readout neuron.

Note: The e-prop synapse calls this function of the target node. If true, it skips weight updates within the first interval step of the update interval.

Returns: true if the node is an eprop recurrent node, false otherwise.

Exceptions

IllegalConnection

Reimplemented from nest::Node.

void nest::eprop_readout_bsshslm_2020::set_status ( const Dictionary & )

inlineoverridevirtual

Change properties of the node according to the entries in the dictionary.

Parameters

d	Dictionary with named parameter settings.

Implements nest::Node.

References P_, S_, nest::eprop_readout_bsshslm_2020::State_::set(), nest::eprop_readout_bsshslm_2020::Parameters_::set(), and nest::EpropArchivingNodeReadout< hist_shift_required >::set_status().

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◆ update()

void nest::eprop_readout_bsshslm_2020::update	(	Time const &	,
		const long	,
		const long
	)

overrideprivatevirtual

Advance the state of the node in time through the given interval.

This method advances the state of the node through the interval (origin+from, origin+to], which is at most min_delay long.

Precondition: State of the node corresponds to the time origin+from.
Postcondition: State of the node corresponds to the time origin+to.

Each step between from and to corresponds to one simulation timestep (nest.resolution).

If events are emitted, they have time stamps in the interval T+from+1 .. T+to.

Parameters

origin	network time at beginning of time slice
from	initial step inside time slice
to	post-final step inside time slice

Implements nest::Node.

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Friends And Related Symbol Documentation

◆ RecordablesMap< eprop_readout_bsshslm_2020 >

private

Structure of internal variables.

Referenced by compute_gradient(), pre_run_hook(), and update().

The documentation for this class was generated from the following files:

	NEST main@caf0ae8

Classes

Public Member Functions

Private Types

Private Member Functions

Private Attributes

Static Private Attributes

Friends

Additional Inherited Members

Detailed Description

Member Enumeration Documentation

◆ RateSynapseTypes

Constructor & Destructor Documentation

◆ eprop_readout_bsshslm_2020() [1/2]

◆ eprop_readout_bsshslm_2020() [2/2]

Member Function Documentation

◆ compute_error_signal_cross_entropy()

◆ compute_error_signal_mean_squared_error()

◆ compute_gradient()

◆ get_error_signal_()

◆ get_readout_signal_()

◆ get_readout_signal_unnorm_()

◆ get_shift()

◆ get_status()

◆ get_target_signal_()

◆ get_v_m_()

◆ handle() [1/18]

◆ handle() [2/18]

◆ handle() [3/18]

◆ handle() [4/18]

◆ handle() [5/18]

◆ handle() [6/18]

◆ handle() [7/18]

◆ handle() [8/18]

◆ handle() [9/18]

◆ handle() [10/18]

◆ handle() [11/18]

◆ handle() [12/18]

◆ handle() [13/18]

◆ handle() [14/18]

◆ handle() [15/18]

◆ handle() [16/18]

◆ handle() [17/18]

◆ handle() [18/18]

◆ handles_test_event() [1/19]

◆ handles_test_event() [2/19]

◆ handles_test_event() [3/19]

◆ handles_test_event() [4/19]

◆ handles_test_event() [5/19]

◆ handles_test_event() [6/19]

◆ handles_test_event() [7/19]

◆ handles_test_event() [8/19]

◆ handles_test_event() [9/19]

◆ handles_test_event() [10/19]

◆ handles_test_event() [11/19]

◆ handles_test_event() [12/19]

◆ handles_test_event() [13/19]

◆ handles_test_event() [14/19]

◆ handles_test_event() [15/19]

◆ handles_test_event() [16/19]

◆ handles_test_event() [17/19]

◆ handles_test_event() [18/19]

◆ handles_test_event() [19/19]

◆ init_buffers_()

◆ is_eprop_recurrent_node()

◆ pre_run_hook()

◆ sends_secondary_event() [1/8]

◆ sends_secondary_event() [2/8]

◆ sends_secondary_event() [3/8]

◆ sends_secondary_event() [4/8]

◆ sends_secondary_event() [5/8]

◆ sends_secondary_event() [6/8]

◆ sends_secondary_event() [7/8]

◆ sends_secondary_event() [8/8]

◆ set_status()

◆ update()

Friends And Related Symbol Documentation

◆ RecordablesMap< eprop_readout_bsshslm_2020 >

◆ UniversalDataLogger< eprop_readout_bsshslm_2020 >

Member Data Documentation

◆ B_